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Jason Green

Degree Program
Ph.D.

Email
jason.green@mail.missouri.edu

Awards / Activities

  • National Library of Medicine Pre-Doctoral Fellow (Jul 2006 - Jun 2011)
  • 2009 Missouri Honor Award for CS Department - Outstanding Graduate Student
  • Vice-President of MU's Association for Computing Machinery (ACM) chapter (Jan 2007 - Apr 2010)
  • Presidential Scholar in 2000
  • Instructor of CS4380/7380: Database Management Systems I (Spring 2012, Spring 2011, Spring 2010, Fall 2009)
  • Instructor of CS3380: Database Applications and Information Systems (Spring 2008, Fall 2008)
  • Guest Lecturer for INFOINST 7005 (Fall 2010)
  • Mentoring of Senior Independent Study Project (Fall 2011)
  • Mentoring of Senior Capstone Project - Flora (Spring 2011)
  • TA for CS4380 (Fall 2007)
  • TA for CS3380 (Spring 2007)
  • Reviewer for IEEE Transactions on Education

Specialties
Information Retrieval
Image Processing
Database Indexing
Data Mining
Content-Based Information Retrieval

Research Projects
VPhenoDBS
Lymphedema Cyber Infrastructure Project

       

Biography
Jason Green graduated Summa Cum Laude from the University of Missouri in May 2005 with BS degrees in Computer Science, Computer Engineering, and Mathematics.  He then continued his academic career pursuing a doctoral degree in Computer Science at MU under the tutelage of Dr. Chi-Ren Shyu.  Along the way, he decided to complete an MS degree in CS (2009).  His current research interests include plant phenotype quantification through imagery, databases, and information retrieval.


Publications

    Journal
    • Jason Green, Jaturon Harnsomburana, Mary Schaeffer, Carolyn Lawerence, Leszek Vincent, and Chi-Ren Shyu. Multi-Source and Ontology-Based Retrieval Engine for Maize Mutant Phenotypes, in Database 2011
    • Jaturon Harnsomburana, Jason Green, Adrian Barb, Mary Schaeffer, and Chi-Ren Shyu. Computable Visually-Observed Phenotype Ontological Framework for Plants, in BMC Bioinformatics, Vol. 12, No. 1 2011
    • Bonnie Lasinski, Kathryn Thrift, DeCourcy Squire, Melanie Austin, Kandis Smith, Ausanee Wanchai, Jason Green, Bob R. Stewart, Jane Armer, and Janice N. Cormier. A Systematic Review of the Evidence for Complete Decongestive Therapy (CDT) from 2004-2010, in submitted to Archives of Physical Medicine and Rehabilitation, October 2011
    • Jason Green, Wannapa Kay Mahamaneerat, Chi-Ren Shyu, Janice N. Cormier, Mugur V. Geana, Saskia J. Thiadens, and Jane Armer. Knowledge Discovery from the National Lymphedema Network Survey Data, in Lymphology, Vol. 41, No. Suppl , Shanghai, China 2008
    • Chi-Ren Shyu, Jason Green, D. P. K. Lun, Toni Kazic, M. Schaeffer, and Ed Coe. Image Analysis for Mapping Immeasurable Phenotypes in Maize, in IEEE Signal Processing Magazine, Vol. 24, No. 3 , May 2007; 115-118
    • Chi-Ren Shyu, Jaturon Harnsomburana, Jason Green, Adrian Barb, Toni Kazic, M. Schaeffer, and Ed Coe. Searching and mining visually-observed phenotypes of maize mutants, in Journal of Bioinformatics and Computational Biology, Special Issue on Making Sense of Mutations Requires Knowledge Management, Vol. 5, No. 6 , December 2007; 1193-1213
    Poster
    • Jason Green, Heidi Appel, and Chi-Ren Shyu. Automatic Algorithmic Computation of Leaf Area from Controlled Imagery, in Plant and Animal Genome XIX Conference, San Diego, CA, January 2011
    • Jing Ginger Han, Jason Green, and Chi-Ren Shyu. Multi-Module Content-Based Image Retrieval in Medical Image Databases, in American Medical Informatics Association 2010 Annual Symposium, Washington, D.C., October 2010
    • Shuyu (Christine) Xu, Jason Green, Jane Armer, Bob R. Stewart, and Chi-Ren Shyu. Matching Lymphedema Patient Profiles with Data Mining Results Using Evidence-based Information from the Minimum Data Set, in American Medical Informatics Association 2010 Annual Symposium, Washington, D.C., November 2010
    • G Johal, S Chintamanani, Rahul Dhawan, Adisu Negeri, A Garg, BP Venkata, Jason Green, Jaturon Harnsomburana, Chi-Ren Shyu, Cliff Weil, and Peter Balint-Kurti. Mutant-assisted exploration of natural variation underlying R gene-mediated immunity in maize, in the 52nd Maize Meeting, March 2010
    • Jason Green, Jaturon Harnsomburana, S Chintamanani, Cliff Weil, G Johal, Rahul Dhawan, Peter Balint-Kurti, and Chi-Ren Shyu. Multi-Site Maize Les Mutant Comparison by Applying Computational Methods to Phenotype Imagery, in Plant and Animal Genome XVIII Conference, San Diego, CA, January 2010
    • Sowjanya Paladugu, Jason Green, Robin Shook, Jane Armer, Bob R. Stewart, and Chi-Ren Shyu. Temporal Analysis of Limb Volume Changes in Breast Cancer Lymphedema Patients, in the 22nd International Congress of Lymphology, September 2009
    • Jason Green, Jaturon Harnsomburana, Cynthia Farmer, Mary Schaeffer, and Chi-Ren Shyu. Utilizing Maize-Related Ontologies for Phenotype Text Search, in the 51st Maize Genetics Conference, St. Charles, IL, March 2009
    • Peter Balint-Kurti, A Belcher, Jason Green, K Kump, R Nelson, Chi-Ren Shyu, Randy Wisser, J Zwonitzer, and G Johal. The Analysis of Quantitative Resistance to Foliar Diseases of Maize, in the 50th Maize Genetics Conference, Washington, D.C., March 2008
    • Jason Green, Dayang Hao, Jaturon Harnsomburana, and Chi-Ren Shyu. Automatic Differentiation of Maize Les Mutants Using Image Content, in Plant and Animal Genome XVII Conference, San Diego, CA, January 2008
    • Jaturon Harnsomburana, Jason Green, Adrian Barb, Mary Schaeffer, Leszek Vincent, and Chi-Ren Shyu. VPhenoO: Visually-Observed Phenotype Ontology, in Plant and Animal Genome XVII Conference, San Diego, CA, January 2008
    • Jason Green, and Chi-Ren Shyu. A Computational Approach for Scoring Visually Observed Phenotypic Expression in Maize, in the 49th Maize Genetics Conference, March 2007
    • Toni Kazic, Jason Green, Jaturon Harnsomburana, and Chi-Ren Shyu. Quantification of Lesion Phenotypes as a Function of Inbred Background, in the 49th Maize Genetics Conference, March 2007
    • Chi-Ren Shyu, Jason Green, Cynthia Farmer, Toni Kazic, Ed Coe, Mary Schaeffer, Carolyn Lawerence, M. Millard, P. Cyr, and C. Gardner. A Framework of Complex Queries For Plant Phenotype Image Databases, in Plant and Animal Genome XIV Conference, San Diego, CA, January 2006
    • Chi-Ren Shyu, Jason Green, Cynthia Farmer, Toni Kazic, Ed Coe, Mary Schaeffer, M. Millard, P. Cyr, and C. Gardner. A Computational Approach for Characterizing Standardized Phenotypic Images for Maize, in the 48th Maize Genetics Conference, March 2006
    Conference
    • Jason Green, Sowjanya Paladugu, Jane Armer, Bob R. Stewart, and Chi-Ren Shyu. Using Temporal Mining to Examine the Development of Lymphedema, in NLM Informatics Training Conference 2011, Bethesda, MD, June 2011
    • Jason Green, Wannapa Kay Mahamaneerat, Chi-Ren Shyu, Janice N. Cormier, Mugur V. Geana, Saskia J. Thiadens, and Jane Armer. Knowledge Discovery and Data Mining Approach for Relationships in National Lymphedema Network Web-Based Survey Data, in the 2008 National Lymphedema Network (NLN) Conference, San Diego, CA, August 2008
    • Wannapa Kay Mahamaneerat, Tetsuya Kobayashi, and Jason Green. Domain-Concept Mining on the 2005 Nationwide Inpatient Sample Data, in The American Medical Informatics Association (AMIA) 2007 Annual Symposium, Knowledge Discovery and Data Mining Working Group (KDDM-WG), Data Mining Competition Winner, November 2007
    Workshop
    • Jane Armer, Bob R. Stewart, Chi-Ren Shyu, Wannapa Kay Mahamaneerat, Orawan Nukaew, Tetsuya Kobayashi, Jason Green, Saskia J. Thiadens, and VC Nikodem. Multi-disciplinary, multi-method research in post-breast cancer lymphedema and survivorship, in The World Conference on Breast Cancer Foundation (WCBCF), Winnipeg, Canada, June 2008
    • Chi-Ren Shyu, Jason Green, Jaturon Harnsomburana, Dayang Hao, and Adrian Barb. VPhenoDBS-Maize: A Web-Based Search Engine for Maize Phenotypes, in Plant and Animal Genome XVII Conference, San Diego, CA, January 2008


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